Johann Wilhelm Karl Moritz

Abstract Snake conservation in Colombia is limited by the lack of information on ecological aspects and distribution ranges, particularly at the departmental level. Herein, we analyzed the state of knowledge of snakes in the department of Tolima, based on a thorough review of literature, and biological collection databases. We found 91 species documented either in literature (82) or museum collections (67). 24 species reported in literature are not supported by specimens in collections and nine species in museum collections don’t have been documented in the literature. We found a large gap in snake occurrence records throughout the department. Remarkably, 48 species reported for the department are outside of their current accepted distribution emphasizing the need of ID corroboration. There are only 35 snake species that have all the necessary information to corroborate their presence in the department, showing the need for a more thorough taxonomic effort to clearly define the actual snake richness. These results serve as a basis for future research and reflect the need to join efforts to characterize and understand the ophidian fauna of the department of Tolima and across Colombia.

The flowering phenology of many tropical mountain forest tree species remains poorly understood, including flowering synchrony and its drivers across neotropical ecosystems. We obtained herbarium records for 427 tree species from a long-term monitoring transect on the northwestern Ecuadorian Andes, sourced from the Global Biodiversity Information Facility and the Herbario Nacional del Ecuador. Using machine learning algorithms, we identified flowering phenophases from digitized specimen labels and applied circular statistics to build phenological calendars across six climatic regions within the neotropics. We found 47 939 herbarium records, of which 14 938 were classified as flowering by Random Forest Models. We constructed phenological calendars for six regions and 86 species with at least 20 flowering records. Phenological patterns varied considerably across regions, among species within regions, and within species across regions. There was limited interannual synchronicity in flowering patterns within regions primarily driven by bimodal species whose flowering peaks coincided with irradiance peaks. The predominantly high variability of phenological patterns among species and within species likely confers adaptative advantages by reducing interspecific competition during reproductive periods and promoting species coexistence in highly diverse regions with little or no seasonality.

Cold tolerance strategies in plants vary from structural to biochemical permitting many plants to survive and grow on sites that experience freezing conditions intermittently. Although tree ferns occur predominantly across the tropics, they also occur in temperate zones and occasionally in areas that experience sub‐zero temperatures, and how these large ferns survive freezing conditions is unknown. Many temperate tree fern taxa are marcescent – retaining whorls of dead fronds encircling the upper trunk – or develop short or prostrate trunks, possibly to insulate against frost damage to their trunks and growing crowns. We asked the following questions: 1) do global growth patterns and traits of tree ferns respond to freezing conditions associated with latitude and elevation, 2) do growth patterns of tree ferns in New Zealand vary along a temperature‐related gradient, and 3) do marcescent tree fern skirts insulate the growing crown from sub‐zero temperatures? To establish what morphological adaptations permitted the Cyatheales to occur in biomes that experience intermittent sub‐zero temperatures and frost, we 1) reviewed the global distributions of these structural and morphological traits within the tree ferns (Cyatheales); 2) assessed the patterns of tree fern marcescence, and other traits potentially associated with cold tolerance (no trunk, prostrate, short‐trunked) of nine taxa of the Cyatheales along environmental gradients across New Zealand; and 3) conducted a field experiment to assess the thermal insulation properties of tree fern marcescent skirts. We identified significant trends among growth forms, marcescence, and environmental gradients consistent with our hypothesis that these are adaptations to tolerate cold. Our field experiments provide quantitative evidence that marcescent skirts have a strong insulating effect on tree fern trunks. The Cyatheales have evolved several strategies to protect the pith cores of their trunks from extreme cold temperatures in temperate forests allowing them to capture niche space in environments beyond the tropics.

The checklist includes a listing of the genera and species of North American Bryophyta thought to occur in the continental United States and Canada. The floras of Mexico, Hawaii and Greenland are not included. The current list recognizes 1565 species, 12 subspecies, 34 varieties and one form (for a total of 1612 taxa) in 366 genera and 100 families. As a preface to the list, a systematic arrangement of the families and included genera for North America is presented. Many changes from the previous checklist are documented via footnotes that provide references to where changes were made. Only synonymy since the previous checklist is included. Twenty nomenclatural changes are made. These include 19 new combinations: Bryum brassicoides (≡ Gemmabryum brassicoides), B. pacificum (≡ Ptychostomum pacificum), B. torenii (≡ Imbribryum torenii), B. vinosum (≡ Gemmabryum vinosum), Chionoloma maragniphyllum (≡ Oxystegus maragniphyllus), Lescuraea tribulosa (≡ Pseudoleskea tribulosa), Pterygoneurum 3kieneri (≡ P. subsessile var. kieneri Habeeb), Pylaisiadelpha canadensis (≡ Brotherella canadensis), Streblotrichum convolutum var. eustegium (≡ Barbula eustegia), Streblotrichum convolutum var. gallinula (≡ Barbula convoluta var. gallinula), Voitia angustata (≡ Splachnum angustatum), V. mnioides (≡ Splachnum mnioides), V. pallida (≡ Tetraplodon pallidus), V. paradoxa (≡ Splachnum paradoxum), V. urceolata (≡ Splachnum urceolatum), Warnstorfia badia (≡ Hypnum badium), W. straminea (≡ Hypnum stramineum), W. straminea var. patens (Lindb.) (≡ Amblystegium stramineum var. patens), W. wickesiae (≡ Calliergon wickesiae). A new order is also introduced: Rhizogemmales W.R.Buck & Goffinet (≡ Rhizogemmaceae Bonfim Santos, Siebel & Fedosov).

Abstract The Neotropics have been host to a myriad of geological and climatic events that have shaped the biodiversity present in the region. Bromeliaceae forms one of the most prominent components of the Neotropical flora, being considered the largest group nearly exclusive to the Americas, with almost 4000 species divided into eight subfamilies. Here, we utilize a new time-calibrated molecular phylogeny including 1268 bromeliad taxa and integrate habitat and morphological data to answer the following questions: (i) Are bromeliad subfamilies monophyletic, and did Neogene and Quaternary events in South America coincide with their divergence? (ii) Did naked seeds of berry-fruited species, epiphytic growth, and climatic factors increase bromeliad diversification? Our analysis reconstructed a new topology concerning some recently diverged lineages, with the genus Bromelia emerging as the sister group of a clade including all remaining Bromelioideae lineages + Puyoideae. Miocene events possibly triggered the diversification of bromeliads after a long period of stasis during the Palaeogene. We hypothesize that the morphological shift between Bromelia and Bromelioideae (except Bromelia) is related to the colonization of a new high-elevation environment by Puyoideae in the Andes. Additionally, our results show that naked seeds and the epiphytic growth form positively influence diversification rate, while precipitation, temperature, and elevation have a negative influence. We emphasize the importance of considering a variety of morphological and ecological features to enhance our understanding of bromeliad evolution.

Globally, vector‐borne diseases are increasing in distribution and frequency, affecting humans, domestic animals, and wildlife. Science‐based management and prevention of these diseases requires a sound understanding of the distribution and environmental requirements of the vectors and hosts involved in disease transmission. Integrated Species Distribution Models (ISDM) account for diverse data types through hierarchical modeling and represent a significant advancement in species distribution modeling. We assessed the distribution of the soft tick subspecies Ornithodoros turicata americanus. This tick species is a potential vector of African swine fever virus (ASFV), a pathogen responsible for an ongoing global epizootic that threatens agroindustry worldwide. Given the novelty of this method, we compared the results to a conventional Maxent SDM and validated the results through data partitioning. Our input for the model consisted of systematically collected detection data from 591 sampled field sites and 12 historical species records, as well as four variables describing climatic and soil characteristics. We found that a combination of climatic variables describing seasonality and temperature extremes, along with the amount of sand in the soil, determined the predicted intensity of occurrence of this tick species. When projected in geographic space, this distribution model predicted 62% of Florida as suitable habitat for this tick species. The ISDM presented a higher TSS and AUC than the Maxent conventional model, while sensitivity was similar between both models. Our case example shows the utility of ISDMs in disease ecology studies and highlights the broad range of geographic suitability for this important disease vector. These results provide important foundational information to inform future risk assessment work for tick‐borne relapsing fever surveillance and potential ASF introduction and maintenance in the United States.

Abstract After many decades of effective control of stem rust caused by the Puccinia graminis f.sp. tritici, (hereafter Pgt) the reported emergence of race TTKSK/Ug99 of Pgt in Uganda reignited concerns about epidemics worldwide because ∼90% of world wheat cultivars had no resistance to the new race. Since it was initially detected in Uganda in 1998, Ug99 variants have now been identified in thirteen countries in Africa and the Middle East. Stem rust has been a major problem in the past, and concern is increasing about the risk of return to Central and East Asia. Whilst control programs in North America and Europe relied on the use of resistant cultivars in combination with eradication of barberry (Berberis spp.), the alternate host required for the stem rust pathogen to complete its full lifecycle, the focus in East Asia was principally on the use of resistant wheat cultivars. Here, we investigate potential airborne transmission pathways for stem rust outbreaks in the Middle East to reach East Asia using an integrated modelling framework combining estimates of fungal spore deposition from an atmospheric dispersion model, environmental suitability for spore germination, and crop calendar information. We consider the role of mountain ranges in restricting transmission pathways, and we incorporate a representation of a generic barberry species into the lifecycle. We find viable transmission pathways to East Asia from the Middle East to the north via Central Asia and to the south via South Asia and that an initial infection in the Middle East could persist in East Asia for up to three years due to the presence of the alternate host. Our results indicate the need for further assessment of barberry species distributions in East Asia and appropriate methods for targeted surveillance and mitigation strategies should stem rust incidence increase in the Middle East region.

The tropical Andes region harbors areas that are highly significant for biodiversity at both global and local scales. However, despite the severe conservation threats that this region has to confront, conservation initiatives are limited, by funding and because of the need for more information to decide which areas are priorities for conservation. Identifying Important Plant Areas (IPAs) offers a valuable methodology for establishing conservation priorities, a particularly complex task in a mega-biodiverse region such as the northern Andean tropics. Due to its iconic recognition and conservation value, this study focused on the Espeletiinae subtribe (Asteraceae) as a model group; hence, the distribution data for 138 species was compiled from 5560 georeferenced records. Using the IPA methodology, we divided the study area, this is, the distribution area of the subtribe in the Andean tropics, into 220 Units of Analysis (UA) represented by 10 × 10 km plots. Refined species’ distribution areas, incorporating richness, threatened species, and ecosystem-based richness distributions, were analyzed using newly generated maps to evaluate the conservation value of each UA. Our analysis identified 176 UAs with some level of relevance using sub-criterion cA1 (with 59 species) and 51 UAs using sub-criterion cB (with 76 species). Integrating both criteria, we classified 11 UAs as high-priority, 62 as medium-priority, and 147 as low-priority, highlighting the IPAs that require focused conservation efforts. Two identified high-priority IPAs are located in Venezuela and nine in Colombia, predominantly associated with the Eastern Cordillera. These areas concentrate between 7 and 12 species. They are mainly linked to the páramo complexes of Colombia and the Sierra Nevada in Venezuela, primarily within Cool Temperate Moist Grassland ecosystems on mountains. Our results provide a spatial planning procedure and analytical tool for decision-makers to guide conservation management and actions across northern Andes.

Multiple‐island endemics (MIE) are considered ideal natural subjects to study patterns of island colonization that involve recent population‐level genetic processes. Kleinia neriifolia is a Canarian MIE widespread across the archipelago, which exhibits a close phylogenetic relationship with species in northwest Africa and at the other side of the Sahara Desert. Here, we used target sequencing with plastid skimming (Hyb‐Seq), a dense population‐level sampling of K. neriifolia, and representatives of its African–southern Arabian relatives to infer phylogenetic relationships and divergence times at the species and population levels. Using population genetic techniques and machine learning (convolutional neural networks [CNNs]), we reconstructed phylogeographic relationships and patterns of genetic admixture based on a multilocus SNP nuclear dataset. Phylogenomic analysis based on the nuclear dataset identifies the northwestern African Kleinia anteuphorbium as the sister species of K. neriifolia, with divergence starting in the early Pliocene. Divergence from its sister clade, comprising species from the Horn of Africa and southern Arabia, is dated to the arid Messinian period, lending support to the climatic vicariance origin of the Rand Flora. Phylogeographic model testing with CNNs supports an initial colonization of the central island of Tenerife followed by eastward and westward migration across the archipelago, which resulted in the observed east/west phylogeographic split. Subsequent population extinctions linked to aridification events, and recolonization from Tenerife, are proposed to explain the patterns of genetic admixture in the eastern Canary Islands. We demonstrate that CNNs based on SNPs can be used to discriminate among complex scenarios of island migration and colonization.

Premise Cleomaceae is an important model clade for studies of evolutionary processes including genome evolution, floral form diversification, and photosynthetic pathway evolution. Diversification and divergence patterns in Cleomaceae remain tangled as research has been restricted by its worldwide distribution, limited genetic sampling and species coverage, and a lack of definitive fossil calibration points.MethodsWe used target sequence capture and the Angiosperms353 probe set to perform a phylogenetic study of Cleomaceae. We estimated divergence times and biogeographic analyses to explore the origin and diversification of the family. Seed morphology across extant taxa was documented with multifocal image‐stacking techniques and morphological characters were extracted, analyzed, and compared to fossil records.ResultsWe recovered a well‐supported and resolved phylogenetic tree of Cleomaceae generic relationships that includes 236 (~86%) species. We identified 11 principal clades and confidently placed Cleomella as sister to the rest of the family. Our analyses suggested that Cleomaceae and Brassicaceae diverged ~56 mya, and Cleomaceae began to diversify ~53 mya in the Palearctic and Africa. Multiple transatlantic disjunct distributions were identified. Seeds were imaged from 218 (~80%) species in the family and compared to all known fossil species.ConclusionsOur results represent the most comprehensive phylogenetic study of Cleomaceae to date. We identified transatlantic disjunctions and proposed explanations for these patterns, most likely either long‐distance dispersals or contractions in latitudinal distributions caused by climate change over geological timescales. We found that seed morphology varied considerably but mostly mirrored generic relationships.