Science Enabled by Specimen Data

Ramirez-Villegas, J., C. K. Khoury, H. A. Achicanoy, M. V. Diaz, A. C. Mendez, C. C. Sosa, Z. Kehel, et al. 2022. State of ex situ conservation of landrace groups of 25 major crops. Nature Plants 8: 491–499. https://doi.org/10.1038/s41477-022-01144-8

Crop landraces have unique local agroecological and societal functions and offer important genetic resources for plant breeding. Recognition of the value of landrace diversity and concern about its erosion on farms have led to sustained efforts to establish ex situ collections worldwide. The degree to which these efforts have succeeded in conserving landraces has not been comprehensively assessed. Here we modelled the potential distributions of eco-geographically distinguishable groups of landraces of 25 cereal, pulse and starchy root/tuber/fruit crops within their geographic regions of diversity. We then analysed the extent to which these landrace groups are represented in genebank collections, using geographic and ecological coverage metrics as a proxy for genetic diversity. We find that ex situ conservation of landrace groups is currently moderately comprehensive on average, with substantial variation among crops; a mean of 63% ± 12.6% of distributions is currently represented in genebanks. Breadfruit, bananas and plantains, lentils, common beans, chickpeas, barley and bread wheat landrace groups are among the most fully represented, whereas the largest conservation gaps persist for pearl millet, yams, finger millet, groundnut, potatoes and peas. Geographic regions prioritized for further collection of landrace groups for ex situ conservation include South Asia, the Mediterranean and West Asia, Mesoamerica, sub-Saharan Africa, the Andean mountains of South America and Central to East Asia. With further progress to fill these gaps, a high degree of representation of landrace group diversity in genebanks is feasible globally, thus fulfilling international targets for their ex situ conservation. By analysing the state of representation of traditional varieties of 25 major crops in ex situ repositories, this study demonstrates conservation progress made over more than a half-century and identifies the gaps remaining to be filled.

Méndez-Camacho, K., O. Leon-Alvarado, and D. R. Miranda-Esquivel. 2021. Biogeographic evidence supports the Old Amazon hypothesis for the formation of the Amazon fluvial system. PeerJ 9: e12533. https://doi.org/10.7717/peerj.12533

The Amazon has high biodiversity, which has been attributed to different geological events such as the formation of rivers. The Old and Young Amazon hypotheses have been proposed regarding the date of the formation of the Amazon basin. Different studies of historical biogeography support the Young A…

Ellestad, P., F. Forest, M. Serpe, S. J. Novak, and S. Buerki. 2021. Harnessing large-scale biodiversity data to infer the current distribution of Vanilla planifolia (Orchidaceae). Botanical Journal of the Linnean Society 196: 407–422. https://doi.org/10.1093/botlinnean/boab005

Although vanilla is one of the most popular flavours in the world, there is still uncertainty concerning the native distribution of the species that produces it, Vanilla planifolia. To circumscribe the native geographical extent of this economically important species more precisely, we propose a new…

Cardador, L., and T. M. Blackburn. 2020. A global assessment of human influence on niche shifts and risk predictions of bird invasions B. McGill [ed.],. Global Ecology and Biogeography 29: 1956–1966. https://doi.org/10.1111/geb.13166

Aim: Estimating the strength of niche conservatism is key for predictions of invasion risk. Most studies consider only the climatic niche, but other factors, such as human disturbance, also shape niches. Whether occupation of human habitats in the alien range depends on the native tolerances of spec…

Rotenberry, J. T., and P. Balasubramaniam. 2020. Connecting species’ geographical distributions to environmental variables: range maps versus observed points of occurrence. Ecography 43: 897–913. https://doi.org/10.1111/ecog.04871

Connecting the geographical occurrence of a species with underlying environmental variables is fundamental for many analyses of life history evolution and for modeling species distributions for both basic and practical ends. However, raw distributional information comes principally in two forms: poi…

Prieto-Torres, D. A., A. Lira-Noriega, and A. G. Navarro-Sigüenza. 2020. Climate change promotes species loss and uneven modification of richness patterns in the avifauna associated to Neotropical seasonally dry forests. Perspectives in Ecology and Conservation 18: 19–30. https://doi.org/10.1016/j.pecon.2020.01.002

We assessed the effects of global climate change as a driver of spatio-temporal biodiversity patterns in bird assemblages associated to Neotropical seasonally dry forests (NSDF). For this, we estimated the geographic distribution of 719 bird species under current and future climate (2050 and 2070) p…