Science Enabled by Specimen Data

Calvente, A., A. P. Alves da Silva, D. Edler, F. A. Carvalho, M. R. Fantinati, A. Zizka, and A. Antonelli. 2023. Spiny but photogenic: amateur sightings complement herbarium specimens to reveal the bioregions of cacti. American Journal of Botany. https://doi.org/10.1002/ajb2.16235

Premise: Cacti are characteristic elements of the Neotropical flora and of major interest for biogeographic, evolutionary, and ecological studies. Here we test global biogeographic boundaries for Neotropical Cactaceae using specimen‐based occurrences coupled with data from visual observations, as a means to tackle the known collection biases in the family.MethodsSpecies richness and record density were assessed for preserved specimens and human observations and a bioregional scheme tailored to Cactaceae was produced using the interactive web application Infomap Bioregions based on data from 261,272 point records cleaned through automated and manual steps.Key ResultsWe find that areas in Mexico and southwestern USA, Eastern Brazil and along the Andean region have the greatest density of records and the highest species richness. Human observations complement information from preserved specimens substantially, especially along the Andes. We propose 24 cacti bioregions, among which the most species‐rich are: northern Mexico/southwestern USA, central Mexico, southern central Mexico, Central America, Mexican Pacific coast, central and southern Andes, northwestern Mexico/extreme southwestern USA, southwestern Bolivia, northeastern Brazil, Mexico/Baja California.ConclusionsThe bioregionalization proposed shows biogeographical boundaries specific to cacti, and can thereby aid further evolutionary, biogeographic, and ecological studies by providing a validated framework for further analyses. This classification builds upon, and is distinctive from, other expert‐derived regionalization schemes for other taxa. Our results showcase how observation data, including citizen‐science records, can complement traditional specimen‐based data for biogeographic research, particularly for taxa with specific specimen collection and preservation challenges and those that are threatened or internationally protected.This article is protected by copyright. All rights reserved.

Clemente, K. J. E., and M. S. Thomsen. 2023. High temperature frequently increases facilitation between aquatic foundation species: a global meta‐analysis of interaction experiments between angiosperms, seaweeds, and bivalves. Journal of Ecology. https://doi.org/10.1111/1365-2745.14101

Many studies have quantified ecological impacts of individual foundation species (FS). However, emerging data suggest that FS often co‐occur, potentially inhibiting or facilitating one another, thereby causing indirect, cascading effects on surrounding communities. Furthermore, global warming is accelerating, but little is known about how interactions between co‐occurring FS vary with temperature.Shallow aquatic sedimentary systems are often dominated by three types of FS: slower‐growing clonal angiosperms, faster‐growing solitary seaweeds, and shell‐forming filter‐ and deposit‐feeding bivalves. Here, we tested the impacts of one FS on another by analyzing manipulative interaction experiments from 148 papers with a global meta‐analysis.We calculated 1,942 (non‐independent) Hedges’ g effect sizes, from 11,652 extracted values over performance responses, such as abundances, growths or survival of FS, and their associated standard deviations and replication levels. Standard aggregation procedures generated 511 independent Hedges’ g that was classified into six types of reciprocal impacts between FS.We found that (i) seaweeds had consistent negative impacts on angiosperms across performance responses, organismal sizes, experimental approaches, and ecosystem types; (ii) angiosperms and bivalves generally had positive impacts on each other (e.g., positive effects of angiosperms on bivalves were consistent across organismal sizes and experimental approaches, but angiosperm effect on bivalve growth and bivalve effect on angiosperm abundance were not significant); (iii) bivalves positively affected seaweeds (particularly on growth responses); (iv) there were generally no net effects of seaweeds on bivalves (except for positive effect on growth) or angiosperms on seaweeds (except for positive effect on ‘other processes’); and (v) bivalve interactions with other FS were typically more positive at higher temperatures, but angiosperm‐seaweed interactions were not moderated by temperature.Synthesis: Despite variations in experimental and spatiotemporal conditions, the stronger positive interactions at higher temperatures suggest that facilitation, particularly involving bivalves, may become more important in a future warmer world. Importantly, addressing research gaps, such as the scarcity of FS interaction experiments from tropical and freshwater systems and for less studied species, as well as testing for density‐dependent effects, could better inform aquatic ecosystem conservation and restoration efforts and broaden our knowledge of FS interactions in the Anthropocene.

Amaral, D. T., I. A. S. Bonatelli, M. Romeiro-Brito, E. M. Moraes, and F. F. Franco. 2022. Spatial patterns of evolutionary diversity in Cactaceae show low ecological representation within protected areas. Biological Conservation 273: 109677. https://doi.org/10.1016/j.biocon.2022.109677

Mapping biodiversity patterns across taxa and environments is crucial to address the evolutionary and ecological dimensions of species distribution, suggesting areas of particular importance for conservation purposes. Within Cactaceae, spatial diversity patterns are poorly explored, as are the abiotic factors that may predict these patterns. We gathered geographic and genetic data from 921 cactus species by exploring both the occurrence and genetic databases, which are tightly associated with drylands, to evaluate diversity patterns, such as phylogenetic diversity and endemism, paleo-, neo-, and superendemism, and the environmental predictor variables of such patterns in a global analysis. Hotspot areas of cacti diversity are scattered along the Neotropical and Nearctic regions, mainly in the desertic portion of Mesoamerica, Caribbean Island, and the dry diagonal of South America. The geomorphological features of these regions may create a complexity of areas that work as locally buffered zones over time, which triggers local events of diversification and speciation. Desert and dryland/dry forest areas comprise paleo- and superendemism and may act as both museums and cradles of species, displaying great importance for conservation. Past climates, topography, soil features, and solar irradiance seem to be the main predictors of distinct endemism types. The hotspot areas that encompass a major part of the endemism cells are outside or poorly covered by formal protection units. The current legally protected areas are not able to conserve the evolutionary diversity of cacti. Given the rapid anthropogenic disturbance, efforts must be reinforced to monitor biodiversity and the environment and to define/plan current and new protected areas.

Torres-Conde, E. G. 2022. Is simultaneous arrival of pelagic Sargassum and Physalia physalis a new threat to the Atlantic coasts? Estuarine, Coastal and Shelf Science 275: 107971. https://doi.org/10.1016/j.ecss.2022.107971

The massive influxes of pelagic Sargassum and Physalia physalis have become an increasingly recurrent phenomenon on the Atlantic coasts, affecting the economy and the structure of coastal ecosystems. For the first time, a study assesses the simultaneous arrival of these pelagic organisms. This study was conducted from June/2019 through June/2021 on the littoral of La Habana, one of the circulation points of the currents that form the North Atlantic Subtropical Gyre (NASG) run. Transects of 40 m were located parallel to the shoreline, the biomass of pelagic Sargassum was weighed, and the number of colonies of P. physalis was counted at the intertidal zone. The biomass of pelagic Sargassum was estimated as dry biomass. The simultaneous arrival of pelagic Sargassum and P. physalis was reported. Simultaneous arrivals of these pelagic species were recorded in the winter seasons, with the occurrence of cold fronts, low mean temperatures (22–27 °C), and strong northerly winds. Most months with the arrival of these pelagic species coincided with a negative average magnitude of the Arctic Oscillation Index, which favors the occurrence of cold fronts and northerly winds. The mean landing dry biomass of Sargassum during the peak months was low (0.73 ± 0.54 kg/m2) compared to the Mexican Caribbean. 145 P. physalis colonies over 100 m of coast length per year were reported during the study period. The higher visual occurrence of Sargassum natans I and the higher percentage of left-handed P. physalis colonies (56.16 ± 3.37) may indicate that the NASG area, which encloses the Sargasso Sea, could be the primary source of arrivals to La Habana littoral. As reported, the distribution of sightings of pelagic Sargassum and P. physalis coincided in several regions in the Atlantic Ocean and represents an urgent call for coordinated monitoring and development of predictive forecasting of beach landings. This work suggests that there are Atlantic coastal sites such as La Habana littoral that could host the dangerous simultaneous arrivals of pelagic Sargassum and P. physalis. Finally, the use of remote sensing techniques with in situ observations is considered important for future work, since using remote sensing techniques alone seems to miss important events such as those documented in this study.

Bernal‐Escobar, M., D. Zuleta, and K. J. Feeley. 2022. Changes in the climate suitability and growth rates of trees in eastern North America. Ecography 2022. https://doi.org/10.1111/ecog.06298

According to the ‘fitness‐suitability' hypothesis, ongoing changes in climate are expected to affect habitat suitability and hence species' fitness. In trees, differences in fitness may manifest as changes in growth rates, which will alter carbon uptake. Using tree‐ring data, we calculated > 1.5 million annual stem growth rate estimates (standardized for tree size) for 15 677 trees representing 37 species from 558 populations throughout eastern North America. We used collections data and species distribution models to estimate each population's climatic suitability from 1900 to 2010. We then assessed the relationships between growth, suitability and time using linear mixed‐effects models. We found that stem growth rates decreased significantly through time independent of changes in climate suitability and that relationships between growth rates and climate suitability were highly variable across species. Contrary to expectations, we found that growth rates were negatively correlated with species' climate suitability, a relationship that was consistent over time for gymnosperms and became more negative through time for angiosperms. These results may suggest that stem growth rates are not a good proxy for fitness and/or that unidentified factors may be slowing tree growth and outweighing any potential benefits of climate change and increasing atmospheric CO2 concentrations. Regardless of the cause, this finding indicates that we should not count on the increased growth of eastern North American trees to help offset anthropogenic carbon emissions.

Tazikeh, S., S. Zendehboudi, S. Ghafoori, A. Lohi, and N. Mahinpey. 2022. Algal bioenergy production and utilization: Technologies, challenges, and prospects. Journal of Environmental Chemical Engineering 10: 107863. https://doi.org/10.1016/j.jece.2022.107863

Increasing demand for energy and also escalating environmental pollution show that industries cannot rely on fossil fuels, and it is necessary to adopt an alternative. In recent decades, algal bioenergy has emerged as a renewable energy source in different industries. However, algal bioenergy production is costly and faces different challenges and unknown aspects that need to be addressed. Experimental and theoretical research works have revealed that the efficiency of algal bioenergy production is influenced by several factors, including algae species, temperature, light, CO2, cultivation method, and available nutrients. Algal bioenergy production on commercial scales in cost-effective ways is the main aim of industries to compete with fossil fuels. Hence, it is vital to have a comprehensive knowledge of the previous findings and attain a suitable pathway for future studies/activities. In the present review paper, the potential of microalgae bioenergy production, influential parameters, previous experimental and theoretical studies, and different methods for microalgae biofuel production from cultivation stage to utilization are reviewed. Moreover, this work discusses the engineering activities and economic analysis of microalgae cultivation to utilization, and also useful suggestions are made for future research works. The outcomes of the present work confirm that innovative engineering methods can overcome scale-up challenging, increase the rate of production, and decrease the cost of algae bioenergy production. Hence, there is no long way to produce cost-effective algae bioenergy on commercial scales.

Campbell, C., G. Granath, and H. Rydin. 2021. Climatic drivers of Sphagnum species distributions. Frontiers of Biogeography 13. https://doi.org/10.21425/f5fbg51146

Peatmosses(genus Sphagnum) dominate most Northern mires and show distinct distributional limits in Europe despite having efficient dispersal and few dispersal barriers. This pattern indicates that Sphagnum species distributions are strongly linked to climate. Sphagnumdominated mires have been the la…

Laeseke, P., B. Martínez, A. Mansilla, and K. Bischof. 2021. Invaders in waiting? Non-equilibrium in Southern Hemisphere seaweed distributions may lead to underestimation of Antarctic invasion potential. Frontiers of Biogeography 13. https://doi.org/10.21425/f5fbg50879

Bioinvasions pose a major threat to global biodiversity. Correlative Ecological Niche Models (ENMs) can be a valuable tool to identify invaders and invasion sites. However, in cases when species are in non-equilibrium with their native environment (i.e. do not fill their niche), correlative approach…

Xue, T., S. R. Gadagkar, T. P. Albright, X. Yang, J. Li, C. Xia, J. Wu, and S. Yu. 2021. Prioritizing conservation of biodiversity in an alpine region: Distribution pattern and conservation status of seed plants in the Qinghai-Tibetan Plateau. Global Ecology and Conservation 32: e01885. https://doi.org/10.1016/j.gecco.2021.e01885

The Qinghai-Tibetan Plateau (QTP) harbors abundant and diverse plant life owing to its high habitat heterogeneity. However, the distribution pattern of biodiversity hotspots and their conservation status remain unclear. Based on 148,283 high-resolution occurrence coordinates of 13,450 seed plants, w…

Wang, C.-J., and J.-Z. Wan. 2021. Functional trait perspective on suitable habitat distribution of invasive plant species at a global scale. Perspectives in Ecology and Conservation 19: 475–486. https://doi.org/10.1016/j.pecon.2021.07.002

Plant invasion has been proved to threaten biodiversity conservation and ecosystem maintenance at a global scale. It is a challenge to project suitable habitat distributions of invasive plant species (IPS) for invasion risk assessment at large spatial scales. Interaction outcomes between native and …