Science Enabled by Specimen Data

Tabor, J. A., & Koch, J. B. (2021). Ensemble Models Predict Invasive Bee Habitat Suitability Will Expand under Future Climate Scenarios in Hawai’i. Insects, 12(5), 443. doi:10.3390/insects12050443 https://doi.org/10.3390/insects12050443

Climate change is predicted to increase the risk of biological invasions by increasing the availability of climatically suitable regions for invasive species. Endemic species on oceanic islands are particularly sensitive to the impact of invasive species due to increased competition for shared resou…

Chalkowski, K., Morgan, A., Lepczyk, C. A., & Zohdy, S. (2021). Spread of an Avian Eye Fluke, Philophthalmus gralli, through Biological Invasion of an Intermediate Host. Journal of Parasitology, 107(2). doi:10.1645/20-72 https://doi.org/10.1645/20-72

Philophthalmus is a genus of globally distributed parasitic eye flukes with some members of the genus found in disparate locales. In particular, Philophthalmus gralli, a zoonotic trematode, appears to be a relatively new introduction to the Americas, facilitated by spillover from the invasive snails…

Wieringa, J. G., Carstens, B. C., & Gibbs, H. L. (2021). Predicting migration routes for three species of migratory bats using species distribution models. PeerJ, 9, e11177. doi:10.7717/peerj.11177 https://doi.org/10.7717/peerj.11177

Understanding seasonal variation in the distribution and movement patterns of migratory species is essential to monitoring and conservation efforts. While there are many species of migratory bats in North America, little is known about their seasonal movements. In terms of conservation, this is impo…

Ji, Y. (2021). The geographical origin, refugia, and diversification of honey bees (Apis spp.) based on biogeography and niche modeling. Apidologie. doi:10.1007/s13592-020-00826-6 https://doi.org/10.1007/s13592-020-00826-6

An understanding of the origin and formation of biodiversity and distribution patterns can provide a theoretical foundation for biodiversity conservation. In this study, phylogeny and biogeography analyses based on mitochondrial genomes and niche modeling based on occurrence records were performed t…

Orr, M. C., Hughes, A. C., Chesters, D., Pickering, J., Zhu, C.-D., & Ascher, J. S. (2020). Global Patterns and Drivers of Bee Distribution. Current Biology. doi:10.1016/j.cub.2020.10.053 https://doi.org/10.1016/j.cub.2020.10.053

Insects are the focus of many recent studies suggesting population declines, but even invaluable pollination service providers such as bees lack a modern distributional synthesis. Here, we combine a uniquely comprehensive checklist of bee species distributions and >5,800,000 public bee occurrence re…

Ortiz, A. M. D., & Torres, J. N. V. (2020). Assessing the Impacts of Agriculture and Its Trade on Philippine Biodiversity. Land, 9(11), 403. doi:10.3390/land9110403 https://doi.org/10.3390/land9110403

Many Philippine species are at risk of extinction because of habitat loss and degradation driven by agricultural land use and land-use change. The Philippines is one of the world’s primary banana and pineapple producers. The input-intensive style of plantation agriculture for these typically exporte…

Rautsaw, R. M., Schramer, T. D., Acuña, R., Arick, L. N., DiMeo, M., Mercier, K. P., … Parkinson, C. L. (2020). Genomic Adaptations to Salinity Resist Gene Flow in the Evolution of Floridian Watersnakes. Molecular Biology and Evolution. doi:10.1093/molbev/msaa266 https://doi.org/10.1093/molbev/msaa266

The migration-selection balance often governs the evolution of lineages, and speciation with gene flow is now considered common across the tree of life. Ecological speciation is a process that can facilitate divergence despite gene flow due to strong selective pressures caused by ecological differen…

Zizka, A., Antunes Carvalho, F., Calvente, A., Rocio Baez-Lizarazo, M., Cabral, A., Coelho, J. F. R., … Antonelli, A. (2020). No one-size-fits-all solution to clean GBIF. PeerJ, 8, e9916. doi:10.7717/peerj.9916 https://doi.org/10.7717/peerj.9916

Species occurrence records provide the basis for many biodiversity studies. They derive from georeferenced specimens deposited in natural history collections and visual observations, such as those obtained through various mobile applications. Given the rapid increase in availability of such data, th…

Li, X., Li, B., Wang, G., Zhan, X., & Holyoak, M. (2020). Deeply digging the interaction effect in multiple linear regressions using a fractional-power interaction term. MethodsX, 7, 101067. doi:10.1016/j.mex.2020.101067 https://doi.org/10.1016/j.mex.2020.101067

In multiple regression Y ~ β0 + β1X1 + β2X2 + β3X1 X2 + ɛ., the interaction term is quantified as the product of X1 and X2. We developed fractional-power interaction regression (FPIR), using βX1M X2N as the interaction term. The rationale of FPIR is that the slopes of Y-X1 regression along the X2 gr…

Chollett, I., & Robertson, D. R. (2020). Comparing biodiversity databases: Greater Caribbean reef fishes as a case study. Fish and Fisheries. doi:10.1111/faf.12497 https://doi.org/10.1111/faf.12497

There is a widespread need for reliable biodiversity databases for science and conservation. Among the many public databases available, we lack guidance as to how their data quality varies. Here, we compare species distribution data for a well known regional reef fish fauna extracted from five globa…