Science Enabled by Specimen Data

Zizka, A., Antunes Carvalho, F., Calvente, A., Rocio Baez-Lizarazo, M., Cabral, A., Coelho, J. F. R., … Antonelli, A. (2020). No one-size-fits-all solution to clean GBIF. PeerJ, 8, e9916. doi:10.7717/peerj.9916 https://doi.org/10.7717/peerj.9916

Species occurrence records provide the basis for many biodiversity studies. They derive from georeferenced specimens deposited in natural history collections and visual observations, such as those obtained through various mobile applications. Given the rapid increase in availability of such data, th…

Goodwin, Z. A., Muñoz-Rodríguez, P., Harris, D. J., Wells, T., Wood, J. R. I., Filer, D., & Scotland, R. W. (2020). How long does it take to discover a species? Systematics and Biodiversity, 1–10. doi:10.1080/14772000.2020.1751339 https://doi.org/10.1080/14772000.2020.1751339

The description of a new species is a key step in cataloguing the World’s flora. However, this is only a preliminary stage in a long process of understanding what that species represents. We investigated how long the species discovery process takes by focusing on three key stages: 1, the collection …

Peyre, G., Lenoir, J., Karger, D. N., Gomez, M., Gonzalez, A., Broennimann, O., & Guisan, A. (2020). The fate of páramo plant assemblages in the sky islands of the northern Andes. Journal of Vegetation Science. doi:10.1111/jvs.12898 https://doi.org/10.1111/jvs.12898

Aims: Assessing climate change impacts on biodiversity is a main scientific challenge, especially in the tropics, therefore, we predicted the future of plant species and communities on the unique páramo sky islands. We implemented the Spatially Explicit Species Assemblage Modelling framework, by i) …

Stropp, J., Umbelino, B., Correia, R. A., Campos-Silva, J. V., Ladle, R. J., & Malhado, A. C. M. (2020). The ghosts of forests past and future: deforestation and botanical sampling in the Brazilian Amazon. Ecography. doi:10.1111/ecog.05026 https://doi.org/10.1111/ecog.05026

The remarkable biodiversity of the Brazilian Amazon is poorly documented and threatened by deforestation. When undocumented areas become deforested, in addition to losing the fauna and flora, we lose the opportunity to know which unique species had occupied a habitat. Here we quantify such knowledge…

Asase, A., Sainge, M. N., Radji, R. A., Ugbogu, O. A., & Peterson, A. T. (2020). A new model for efficient, need‐driven progress in generating primary biodiversity information resources. Applications in Plant Sciences, 8(1). doi:10.1002/aps3.11318 https://doi.org/10.1002/aps3.11318

Premise: The field of biodiversity informatics has developed rapidly in recent years, with broad availability of large‐scale information resources. However, online biodiversity information is biased spatially as a result of slow and uneven capture and digitization of existing data resources. The Wes…

Zizka, A., Azevedo, J., Leme, E., Neves, B., Costa, A. F., Caceres, D., & Zizka, G. (2019). Biogeography and conservation status of the pineapple family (Bromeliaceae). Diversity and Distributions. doi:10.1111/ddi.13004 https://doi.org/10.1111/ddi.13004

Aim: To provide distribution information and preliminary conservation assessments for all species of the pineapple family (Bromeliaceae), one of the most diverse and ecologically important plant groups of the American tropics—a global biodiversity hotspot. Furthermore, we aim to analyse patterns of …

Karger, D. N., Kessler, M., Conrad, O., Weigelt, P., Kreft, H., König, C., & Zimmermann, N. E. (2019). Why tree lines are lower on islands-Climatic and biogeographic effects hold the answer. Global Ecology and Biogeography. doi:10.1111/geb.12897 https://doi.org/10.1111/geb.12897

Aim: To determine the global position of tree line isotherms, compare it with observed local tree limits on islands and mainlands, and disentangle the potential drivers of a difference between tree line and local tree limit. Location: Global. Time period: 1979–2013. Major taxa studied: Trees. Method…

Antonelli, A., Zizka, A., Carvalho, F. A., Scharn, R., Bacon, C. D., Silvestro, D., & Condamine, F. L. (2018). Amazonia is the primary source of Neotropical biodiversity. Proceedings of the National Academy of Sciences, 115(23), 6034–6039. doi:10.1073/pnas.1713819115 https://doi.org/10.1073/pnas.1713819115

The American tropics (the Neotropics) are the most species-rich realm on Earth, and for centuries, scientists have attempted to understand the origins and evolution of their biodiversity. It is now clear that different regions and taxonomic groups have responded differently to geological and climati…

Sundue, M. A. (2017). Ceradenia spectabilis (Polypodiaceae), a New Species from Cerro del Torrá, Colombia. American Fern Journal, 107(4), 193–199. doi:10.1640/0002-8444-107.4.193 https://doi.org/10.1640/0002-8444-107.4.193

Ceradenia spectabilis, a new species, is described from Cerro del Torrá, an isolated peak in western Colombia well known for harboring rare and narrowly distributed species of plants. The new species is readily distinguished from its congeners by its broadly alate petiole and rachis, creeping rhizom…

Caudullo, G., Welk, E., & San-Miguel-Ayanz, J. (2017). Chorological maps for the main European woody species. Data in Brief, 12, 662–666. doi:10.1016/j.dib.2017.05.007 https://doi.org/10.1016/j.dib.2017.05.007

A novel chorological data compilation for the main European tree and shrub species is presented. This dataset was produced by combining numerous and heterogeneous data collected from 20th century atlas monographs providing complete species distribution maps, and from more recent national to regional…